Genome Biology 近期內容更新

原文連結：https://marketing.springernature.com/SAP/CUAN/ZCUAN_PERSEMAIL?sap-outbound-id=0000011883:1:26504

微信連結：https://mp.weixin.qq.com/s/Ue3WjawIXL0I8ueqd_kJ1A

Genome Biology很高興與您分享本刊近期的亮點文章、徵稿信息和期刊新聞!

精選文集

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Microbiome Biology 特刊正式發行

Genome Medicine 和BMC Biology 共同推出的微生物組生物學的特刊已經正式發行了！本特刊的客座編輯為來自美國加州大學聖地牙哥分校的Rob Knight 教授、賓夕法尼亞大學的Elizabeth Grice 博士、德國蒂賓根大學發育生物學的Ruth Ley博士和來自比利時魯汶大學的Jeroen Raes 博士。本特刊涵蓋微生物學各個領域的研究、方法和評論文章。

亮點文章

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Mechanism of a COMPASS-like complex in Arabidopsis

擬南芥中COMPASS樣複合物的作用機制

Doi：10.1186/s13059-019-1705-4

Anne-Sophie Fiorucci, Clara Bourbousse et al.

來自瑞士洛桑大學的Fiorucci 等人研究發現：COMPASS樣複合物可以利用H2B獨立的單泛素通路來介導擬南芥中H3K4me3的沉積。

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Biological significance of the 13q12.12 locus in lung cancer risk

13q12.12位點在肺癌患病風險中的生物學意義

Doi：10.1186/s13059-019-1696-1

Lipei Shao, Xianglin Zuo et al.

來自中國南京醫科大學的Lipei Shao等人探討了13q12.12位點是如何與肺癌的患病風險息息相關的，他們的研究揭示了可能存在一種新型的對p53有應答的增強子參與到上述作用機制中。

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CellTag Indexing: genetic barcode-based sample multiplexing for single-cell genomics

CellTag索引：將基於遺傳條形碼的樣本復用於單細胞基因組中

Doi：10.1186/s13059-019-1699-y

Chuner Guo, Wenjun Kong et al.

來自華盛頓大學聖路易斯醫學院的研究者發現了一種新的單細胞研究方法，可以利用預定義的遺傳條形碼在體外和體內隨時間變化對混合樣本進行標記和跟蹤。

其他內容

Next-generation genome annotation: we still struggle to get it right

Steven L. Salzberg

Doi: 10.1186/s13059-019-1715-2

At the forefront of the sequencing revolution—notes from the RNGS19 conference

Sander Wuyts and Nicola Segata

Doi: 10.1186/s13059-019-1714-3

One reference genome is not enough

Xiaofei Yang et. al.

Doi: 10.1186/s13059-019-1717-0

Mouse microbiomes: overlooked culprits of experimental variability

Maria-Luisa Alegre

Doi: 10.1186/s13059-019-1723-2

Genome-wide analysis of DNA replication timing in single cells: Yes! We’re all individuals

Anne D. Donaldson and Conrad A. Nieduszynski

Doi: 10.1186/s13059-019-1719-y

Genomics and data science: an application within an umbrella

Fábio C. P. Navarro, et al.

Doi: 10.1186/s13059-019-1724-1

Addressing confounding artifacts in reconstruction of gene co-expression networks

Princy Parsana et al.

Doi: 10.1186/s13059-019-1700-9

Isolation of novel gut bifidobacteria using a combination of metagenomic and cultivation approaches

Gabriele Andrea Lugli et al.

Doi: 10.1186/s13059-019-1711-6

Human cleaving embryos enable robust homozygotic nucleotide substitutions by base editors

Meiling Zhang et. al.

Doi: 10.1186/s13059-019-1703-6

VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer

Andrew N. Holding et al.

Doi: 10.1186/s13059-019-1698-z

Genomic signatures accompanying the dietary shift to phytophagy in polyphagan beetles

Mathieu Seppey et al.

Doi: 10.1186/s13059-019-1704-5

Systematic analysis of dark and camouflaged genes reveals disease-relevant genes hiding in plain sight

Mark T. W. Ebbert et al.

Doi: 10.1186/s13059-019-1707-2

Detection of circular RNA expression and related quantitative trait loci in the human dorsolateral prefrontal cortex

Zelin Liu et al.

Doi: 10.1186/s13059-019-1701-8

SCRABBLE: single-cell RNA-seq imputation constrained by bulk RNA-seq data

Tao Peng et al.

Doi: 10.1186/s13059-019-1681-8

ChiCMaxima: a robust and simple pipeline for detection and visualization of chromatin looping in Capture Hi-C

Yousra Ben Zouari et. al.

Doi: 10.1186/s13059-019-1706-3

WhoGEM: an admixture-based prediction machine accurately predicts quantitative functional traits in plants

Laurent Gentzbittel et al.

Doi: 10.1186/s13059-019-1697-0

OSCA: a tool for omic-data-based complex trait analysis

Futao Zhang et al.

Doi: 10.1186/s13059-019-1718-z

Correction to: Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome

Warren A Cheung et al.

Doi: 10.1186/s13059-019-1702-7

Comments on the model parameters in 「SiFit: inferring tumor trees from single-cell sequencing data under finite-sites models」

Hamim Zafar et al.

Doi: 10.1186/s13059-019-1692-5

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https://marketing.springernature.com/SAP/CUAN/ZCUAN_PERSEMAIL?sap-outbound-id=0000011883:1:26504

（來源：科學網）

 

 

 

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