每日摘要:原禾屬植物Pharus latifolius基因組(Plant Cell)

2021-02-20 植物類SCI摘要

背景回顧:The grass family (Poaceae) includes all commercial cereal crops and is a major contributor to biomass in various terrestrial ecosystems.

提出問題:The ancestry of all grass genomes includes a shared whole-genome duplication (WGD), named rho (ρ) WGD, but the evolutionary significance of ρ-WGD remains elusive.

主要研究:We sequenced the genome of Pharus latifolius, a grass species (producing a true spikelet) in the subfamily Pharoideae, a sister lineage to the core Poaceae including the PACMAD and BOP clades.

結果1-基因組演化:Our results indicate that the P. latifolius genome has evolved slowly relative to cereal grass genomes, as reflected by moderate rates of molecular evolution, limited chromosome rearrangements and a low rate of gene loss for duplicated genes.

結果2-ρ-WGD時間與後續支系分化:We show that the ρ-WGD event occurred ∼98.2 million years ago (Ma) in a common ancestor of the Pharoideae and the PACMAD and BOP grasses. This was followed by contrasting patterns of diploidization in the Pharus and core Poaceae lineages.

結果3-ρ-WGD作用:The presence of two FRIZZY PANICLE (FZP)-like genes in P. latifolius, and duplicated MADS-box genes, support the hypothesis that the ρ-WGD may have played a role in the origin and functional diversification of the spikelet, an adaptation in grasses related directly to cereal yields.

結論:The P. latifolius genome sheds light on the origin and early evolution of grasses underpinning the biology and breeding of cereals.

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